MSV

Bonsai team

Algorithms for large-scale sequence analysis

Leader: Hélène Touzet

PRESENTATION MEMBERS THESES PUBLICATIONS

Presentation

The objective of BONSAI is to develop better algorithms and models for biological sequence analysis. This includes the following topics: genome annotation, high throughput sequencing, metagenomics, gene structure, genome structure, noncoding RNA, non ribosomal peptides. From a methodological viewpoint, this research is based on a strong background coming from discrete algorithms, such as stringology and graph theory, index data structures. It also finds its expression in the development of open source software and validation of biological data.

Members

Quentin Bonenfant

Algorithmes bioinformatiques pour l'analyse de données de séquençage de troisième génération

Coralie Rohmer

Développement d'algorithmes pour le séquençage de 3ème génération

Les autres équipes du groupe thématique ' MSV '

BioComputing